Hector Corrada Bravo

496 posts

Hector Corrada Bravo

Hector Corrada Bravo

@hcorrada

Director and Lead, AI Methods for Functional Genomics; Biology Research | AI Development (BRAID); Genentech Computational Sciences (gCS)

Katılım Mart 2011
1.6K Takip Edilen1.1K Takipçiler
Hector Corrada Bravo retweetledi
Anshul Kundaje
Anshul Kundaje@anshulkundaje·
Exciting new unifying framework for supervised, self supervised & semi supervised learning for regulatory genomics. Cool applications. Going to bet this flexibility will become increasingly popular. Well suited to multimodal, multi context genomic profiling & sequencing data. 1/
Surag Nair@suragnair

Excited to share Nona: a unifying multimodal masking framework for functional genomics. Models for DNA have evolved along separate paths: sequence-to-function (AlphaGenome), language models (Evo2), and generative models (DDSM). Can these be unified under a single paradigm? 1/15

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Hector Corrada Bravo
Hector Corrada Bravo@hcorrada·
This has been a wonder to see from inception. Superbly creative, principled and talented scientists. Take a look, imagine other useful masking strategies and let us know. Finally, postdoc position ad at the end of the thread.
Surag Nair@suragnair

Excited to share Nona: a unifying multimodal masking framework for functional genomics. Models for DNA have evolved along separate paths: sequence-to-function (AlphaGenome), language models (Evo2), and generative models (DDSM). Can these be unified under a single paradigm? 1/15

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Kyunghyun Cho
Kyunghyun Cho@kchonyc·
it's been 3+ years since @RichBonneauNYC, @GligorijevicV and i founded @PrescientDesign early 2021. from day 0, my goal has always been to build a lab-in-the-loop protein design platform (see the figure from our very early pitch deck 😂), and during the past 3+ years (mostly as part of gRED), our growing team has almost obsessively stuck to this goal. in doing so, we had to advance frontiers of multiple disciplines, including ML & bio, and double down on building strong s/w foundations. yesterday at #ICLR2024, i had an immense pleasure to share our progress in lab-in-the-loop antibody design and where our true ambition is at, with the community (iclr.cc/virtual/2024/i…), on behalf of Prescient Design and our colleagues at Genentech/Roche. what a ride it's been!
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Aya Abdelsalam Ismail
Aya Abdelsalam Ismail@asalam_91·
Check out our work today at #ICLR2024. We insert a concept bottleneck layer into generative models, which allows us to interpret, control, and debug them. This is a first step towards interpretable generative modeling! @juliusadml @hcorrada @stephenrra @kchonyc
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Hector Corrada Bravo
Hector Corrada Bravo@hcorrada·
My lab has a postdoc open: careers.gene.com/us/en/job/2024… Exciting opportunity to work along our larger "Cellular States and Organization (CSO)" group within the Biology Research AI (BRAID) Department and with @Gschuller_k lab in the Cellular and Tissue Genomics (CTG) Department.
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Aya Abdelsalam Ismail
Aya Abdelsalam Ismail@asalam_91·
We are looking for an intern with a strong ML and interpretability background to join me, @juliusadml, and the amazing @PrescientDesign @genentech team next summer as an intern in our NYC office! We will be adding interpretability to LLMs with applications in drug discovery. 🧵1/
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Graham Heimberg
Graham Heimberg@gheimberg·
Ever analyze a scRNAseq dataset and wonder if a specific cell state has been seen before? And if so, where in the human body? Under what conditions? Well, now you can use our lightning fast SCimilarity search and foundational model for that! ⚡️🔎🧬 biorxiv.org/content/10.110… (1/11)
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George Stagg
George Stagg@gwstagg·
webR v0.1.0 has just been released! I'm super excited to see what people create by using webR in their own projects 😃. The docs are at docs.r-wasm.org and I've written an introductory blog post talking more about the kind of things webR can do at tidyverse.org/blog/2023/03/w….
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Hector Corrada Bravo
Hector Corrada Bravo@hcorrada·
We're hiring!! Integrative visualization, spatial profiling and perturbations! Research Software Engineer - Visualization and Interactive Data Analysis : South San Francisco bit.ly/3Cp21zr
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Caleb_Franklin
Caleb_Franklin@Caleb_Franklin·
@VanLathan Santorini for sure. But if you can hop over to Naxos or Crete you’re in for a real treat
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Van Lathan Jr
Van Lathan Jr@VanLathan·
Santorini or Mykonos? For those that have been?
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Hector Corrada Bravo
Hector Corrada Bravo@hcorrada·
@lpachter I’ve found PhD defenses and graduations are really high on the list of things I miss most moving to industry. The ritual, the celebration and reflection of seeing someone succeed is so unique. They should be treasured like this.
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Lior Pachter
Lior Pachter@lpachter·
Graduations fill me with hope. Here's to tomorrow!
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Max W. Shen
Max W. Shen@maxwshen·
I am hiring for a pure ML research scientist role: 80% publishing with complete research freedom, 20% consulting and collaborating on applied ML, in a legendary biotech company with a vibrant scientific environment and academia-like culture. careers.gene.com/us/en/job/GENE….
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Keşfet

@RichBonneauNYC @GligorijevicV @juliusadml @kchonyc @genentech @PratapNoor @gwstagg @jayaram