Maciej Dobrzynski

Code an image classifier from scratch using numpy only. Watch the network train on a nano dataset. github.com/dmattek/tutori… #MachineLearning #NeuralNetworks #tutorial #Python

A step-by-step tutorial for detecting collective phenomena in time-lapse images in a new #OpenAccess article in Methods in Microscopy from @degruyter_brill @benigraedel @paoloarmando83 @PertzL, doi.org/10.1515/mim-20…

@david_legland blows the minds of students and teachers alike. Do NOT measure a shape's perimeter by counting pixels! See @ahklemm and @cmci_'s reactions at #EMBOBioImage

Our training at #EMBOBioImage @EMBLEvents Feels like I’ve stepped into NASA’s Mission Control. 🚀👩‍🚀 Expecting a countdown for Ctrl+Alt+Delete any moment now. 🤓

#EMBOBioImage poster session @EMBOevents in full swing 🔬🖥️🤯

Catching up with the pre-course material for the Advanced Bioimaging Analysis training in Heidelberg. Looking forward to networking and learning all the latest in #bioimageanalysis @EMBLEvents #EMBOBioImage

A dream software/hardware stack for smart #microscopy developed by our fantastic PhD student @lhinderling

@AssafZaritsky @bengurionu @TelAvivUni @Sari_Natan @Elkabetslab @AssafNahum @miller_gad @CommsBio A very clever approach, congrats 👍🏻 Great to see the paper published!

Our paper is out 💫 We present a computational method to quantify long-range cell-cell force transmission through the extracellular matrix by correlating ECM remodeling fluctuations in live 3D imaging! doi.org/10.1038/s42003… 1/3

@DaveKeating Looking forward to hearing the solution from EC. A day ticket for Europe could solve the issue. Like a single Interrail ticket.

Europe's cross-border-rail problem isn't just tracks & routes. It's also the refusal by train operators to share their timetable data with rivals or 3rd party sites like airlines do In September the 🇪🇺Commission will come out with a proposal to solve this.eutraveltech.eu/event/fireside…

Allow me a little #CrossBorderRail rant. Barcelona-Brussels should be an appealing train route. At 9 hours it's a little over the cusp of what people are willing to endure, but it's doable. However the lack of cooperation between 🇫🇷&🇪🇸 makes it very difficult. 🧵1/6

Finally out! Quantify collective phenomena with our computational tool ARCOS.

@strickland_ev @JasonPTown That’s open science at its finest! 👍🏻

Great to see ARCOS (doi.org/10.1083/jcb.20…) applied to such a beautiful phenomenon 👍🏻

Fund a project that will democratize microfabrication by using cheap, off-the-shelf components #crowdfunding #opensource #Science #technology

don’t be misled by low-order statistics

DL@MBL: Deep Learning for Microscopy Image Analysis (#DLatMBL) Course Dates: August 21 – September 5, 2023 Application Deadline: May 18, 2023 mbl.edu/education/adva…

Fantastic collaborative spirit at 2023 @NEUBIAS_ training and symposium. We need to create sustainable support for the amazing #bioimaging #opensource software and prevent the infamous code rot. Interesting to see @ChanZuckerberg financing so many projects. Thank you all!

Strong Swiss representation at @NEUBIAS_ symposium in Porto🇨🇭💪🏻 @SwissBIAS #ImageAnalysis #MachineLearning #DeepLearning

<chefs kiss> arxiv.org/abs/2304.01393

Are you a grad student, postdoc, or early-career PI and passionate about teaching and learning #bioimageanalysis? So passionate you want to talk about it for 4 days next February with an AMAZING group of folks (see next)? If so, please apply to our @Co_Biologists workshop! 1/3

Daniel Sage insisting us to estimate the CO2 consumption for the computation we use for each bioimage analysis project by a python library offered at codecarbon.io : NEUBIAS Porto 2023