Benjamin Grädel

33 posts

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Benjamin Grädel

Benjamin Grädel

@benigraedel

Phd Student in @PertzL at University of Bern

Bern, Switzerland Katılım Mart 2022
110 Takip Edilen38 Takipçiler
Benjamin Grädel retweetledi
Lucien Hinderling
Lucien Hinderling@lhinderling·
Huge update to Convpaint, and preprint out on bioRxiv! We develop a pixel classifier similar to Ilastik, but built for napari & with technical improvements. Now even works on animals! 1/10
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Thomas Höhener
Thomas Höhener@HohenerThomas·
Great first day with so much interest in our #Lumiplate! Big thanks to @AIChE for hosting such an amazing event in a beautiful location. Proud of the team for what we achieved so far. Huge thanks to everyone involved! #Biotech #Innovation #Conference2024
OptoLumina@OptoLumina

It's been a great start at the 4th Optogenetic Technologies and Applications Conference at @BU_Tweets, with many interested researchers and engaging conversations about our #Lumiplate. 🚀 Come see our Lumiplate in action! 🌟 #Optogenetics #Biotech #Research #OptoLumina

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Lucien Hinderling
Lucien Hinderling@lhinderling·
these dancing cells kill people! video done completely with open source software: stardist for segmentation, trackpy for tracking, @napari_imaging for visualisation, @Blender for video editing
PertzLab@PertzL

just for the pleasure of it, the fine choreography of epithelial cell migration with a PI3K mutation. This is the complex behavior we have to drug to treat cancer ... Movie from @lhinderling . Switch sound on.

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PertzLab
PertzLab@PertzL·
just for the pleasure of it, the fine choreography of epithelial cell migration with a PI3K mutation. This is the complex behavior we have to drug to treat cancer ... Movie from @lhinderling . Switch sound on.
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fabrice senger
fabrice senger@fabrice_senger·
does any one have an opinion so as to why in image processing people mostly implement HDBSCAN rather then OPTIC ?
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Lucien Hinderling
Lucien Hinderling@lhinderling·
Automatic detection of calcium waves with two @napari_imaging plugins: conv-paint (segmentation) and ARCOS (collective events). Links below :)
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Juan Nunez-Iglesias
Juan Nunez-Iglesias@jnuneziglesias·
Ok I’ll start. Can’t narrow it down to one but probably my 2 favourite things I’ve seen: (a) @lhinderling using napari in a closed loop of acquisition -> segmentation -> interaction -> control 🔁 twitter.com/lhinderling/st… 🤯😍we thought it would take longer to do this! #napariAt6
napari@napari_imaging

6 years ago to the minute 🥳🎂, napari co-founder @loicaroyer made the 1st commit to the “napari-core” repo. github.com/napari/napari-… Since then, over 150 community members have contributed to the napari code, docs, & tooling, and over 400 plugins have been developed. #napariAt6

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PertzLab
PertzLab@PertzL·
Check out our recent review on the ever-evolving #MAPK/#ERK signaling dynamics. It never ceases to amaze me how one of the most studied signaling pathways continues to deliver new surprises. Thanks to @paoloarmando83 for writing this with me. sciencedirect.com/science/articl…
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Ewerslab
Ewerslab@ewers_helge·
Paper out: Gene encoded nanoparticles (GEMs) with 180 GFPs are cool tools to track in cells. GEMs reveal biophysical basis of infection, too. Using GPI-anchored nanobody receptors over 6 logs of affinity shows that adhesion energy alone explains uptake! rdcu.be/dFddO
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Tanentzapf Lab
Tanentzapf Lab@TanentzapfLab·
1. Our lab's latest publication, a super fun collaboration with the lab of @AssafZaritsky is now out in @PNASNews. In this paper we describe a phenomenon that allows cells to form increasingly complex communication networks that coordinate their behaviour. pnas.org/doi/10.1073/pn…
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Jerry. C.
Jerry. C.@XiangLeJerry·
The moment I've been waiting for, to showcase the direct visualization of actin nucleators and their cooperative yet competitive assemblies in the #actin cytoskeletal network!! Check out some of our videos below and supplementary files biorxiv.org/content/10.110…
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epithelial mechanics fan club
epithelial mechanics fan club@EpiMechFC·
How do epithelial monolayers respond to external mechanical cues at the tissue scale? Like any other mechanical testing, let’s begin with in-plane deformation modes: stretching, compression, and shearing. A short🧵by @DedenonMathieu
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Lucien Hinderling
Lucien Hinderling@lhinderling·
What if you could talk to your microscope? Honoured to present our work @PertzL on real-time image processing and smart microscopy! Video shows @manager_micro control using #OmegaAgent by @loicaroyer
Tobias Wenzel 👨🏼‍💻👨🏼‍🔬🧫🔬⚙️@MakerTobey

Our #LatinAmerica @napari workshop this Friday is open to all! Join us to hear about some of the most popular plug-ins and how to link #python to #bioimaging hardware. #LIBREhub zoom.us/j/91498853978?… @jnuneziglesias @zoccolermarcelo @RogerDAntuono @lhinderling @TalleyJLambert

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Keşfet

@AIChE @napari_imaging @Blender @lhinderling @fabrice_senger @macdobry @degruyter_brill @paoloarmando83