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@thomas_neitmann

Associate Director of Data Science at Denali Therapeutics | Advocate of using #RStats in pharma | Author of the {ggcharts} and {mdthemes} 📦 | Blogger

Switzerland Katılım Nisan 2020
1K Takip Edilen1.9K Takipçiler
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/usr/bin/env thomas@thomas_neitmann·
A week ago I had my last at Roche. It felt weird to leave such a great organization after almost 4 years of working their and pushing for the adoption of #opensource and in particular #rstats within the company and beyond. Tomorrow a new chapter starts. I'm excited!!
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/usr/bin/env thomas@thomas_neitmann·
@Andreasheenn If you want to contribute as an individual then the easiest way is to indicate on an issue on a repo of interest that you'd liked to tackle it. You'd get support from the team to make sure your first contribution goes smoothly.
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Chi Zhang andreasheenn@fosstodon.org
Chi Zhang [email protected]@Andreasheenn·
@thomas_neitmann Thanks for the talk, very inspiring! I saw on the CDISC website that people can volunteer to learn more about it, might give it a try! Any tips on how to get involved in your open-source collaborative projects?
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/usr/bin/env thomas@thomas_neitmann·
It was a great pleasure presenting about our shift towards leveraging #RStats and other open -source technologies for analyzing and reporting our clinical trials!
R in Pharma@rinpharma

If you missed the @Roche & @genentech webinar on shifting to #opensource as default for #clinicalworkflows & trials, recording is here: youtube.com/watch?v=nqJsLS… You can see webinar Q/A by going to the last minute in youtube & all the comments will populate to the right! #rstats

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/usr/bin/env thomas@thomas_neitmann·
@KravitzEl Yes! In fact we'll be producing every part of the submission package, i.e. SDTM, ADaM and TFLs, in #RStats for all new clinical trials starting Q2 2023.
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/usr/bin/env thomas@thomas_neitmann·
Props to everyone at Roche (100+ people) who've made this transition possible. I may be presenting in the webinar (along with 2 of my great colleagues) but I only served my little part in this effort. It definitely takes a village for such a change to materialize. #RStats
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/usr/bin/env thomas@thomas_neitmann·
Can't wait to kick off 2023 with a #Posit webinar on how Roche is shifting to #RStats as its backbone for analyzing and reporting clinical trials. This has been in the making for 5+ years and we're almost there. Such an exciting time to work in Pharma. Make sure to tune in!
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/usr/bin/env thomas@thomas_neitmann·
I have a confession: it's been a year or so since #RStats version 4.1 has been released and I have yet to use the native pipe operator `|>` 😱
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/usr/bin/env thomas@thomas_neitmann·
Only 4 days left until it's finally time for my #RStats workshop at @rinpharma! Upon popular demand we increased the maximum number of participants so make sure to sign up and save your place at the event.
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1/2 Please join me in the "Clinical Reporting in R" workshop at this year's @rinpharma conference. It's free and virtual so there's no excuse not to show up 😉 The workshop itakes place on Oct 31 & Nov 1 from 10 am to 2 pm EST. 👉 Sign up here: eventbrite.com/e/clinical-rep…

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/usr/bin/env thomas@thomas_neitmann·
2/2 In the workshop we'll walk you through an example of end-to-end clinical reporting using #rstats from SDTM to ADaM to analysis results datasets to final TLGs. We'll use state-of-the-art open-source packages from the pharmaverse. Learn more here: pharmaverse.org
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/usr/bin/env thomas@thomas_neitmann·
1/2 Please join me in the "Clinical Reporting in R" workshop at this year's @rinpharma conference. It's free and virtual so there's no excuse not to show up 😉 The workshop itakes place on Oct 31 & Nov 1 from 10 am to 2 pm EST. 👉 Sign up here: eventbrite.com/e/clinical-rep…
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/usr/bin/env thomas@thomas_neitmann·
@TBroekel @sharon000 It's about plotting so shouldn't mirror either {dplyr} or baseR. It's basically a wrapper around {ggplot2} to create common plots with a more intuitive interface.
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/usr/bin/env thomas@thomas_neitmann·
That feeling when someone else (rther than yourself 😅) writes a blog post about your #RStats package 😍 Thank you very much @sharon000!
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June Choe
June Choe@yjunechoe·
Developing {ggtrace} has led me to the most black magic thing I've ever discovered in R: Using `trace()`, you can inject an expression which, when triggered, will "climb up" to the caller frame and evaluate a `return()` statement in there, highjacking its output from the inside!
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/usr/bin/env thomas@thomas_neitmann·
Thanks for the shout out! A year worth of effort involving more than a dozen individuals from 2 pharma companies jointly working as 1 dev team. Been an awesome experience! One step further along the journey of making #RStats the tool of choice for #datascience in pharma.
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