Benjamin Howden

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Benjamin Howden

Benjamin Howden

@BenjaminHowden

Professor Public Health Microbiology and Infectious Diseases Director MDU PHL @TheDohertyInst; Lead @AusPathoGen Views my own

Melbourne, Victoria Katılım Mayıs 2015
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Benjamin Howden
Benjamin Howden@BenjaminHowden·
Want to help build capacity in public health pathogen bioinformatics in the Asia Pacific region? 🦘Based in Melbourne Australia with @torstenseemann ✈️Travel to and work internationally 🧠Lead strategy, training & infrastructure Applications close soon! jobs.unimelb.edu.au/caw/en/job/918…
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Ryan Wick
Ryan Wick@rrwick·
New year, new assemblies! I'm excited to announce Autocycler, my new tool for consensus assembly of long-read bacterial genomes! It's the successor to Trycycler, designed to be faster and less reliant on user intervention. Check it out: github.com/rrwick/Autocyc… (1/5)
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Anaëlle Fait
Anaëlle Fait@AnaelleFait·
We wrote a review on Staphylococcus aureus response and adaptation to vancomycin 📜 acting for me as a wrap up of my PhD work #sec0010" target="_blank" rel="nofollow noopener">sciencedirect.com/science/articl… 1/4
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Tuyet Hoang
Tuyet Hoang@hktuyet·
What a whirlwind! HUGE thanks to all the global delivery and country partners in pathogen genomics 🧬 who brought all the energy and ideas to our 1st Sustainable Training and Implementation Framework for Public Health workshop #CPG @TheDohertyInst @WHO #IPSN @WHOWPRO @WHOSEARO
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Michelle Wille
Michelle Wille@DuckSwabber·
What a privilege to be a 2024 Victorian Young Tall Poppy #YTP24 for outstanding research and communication. Enjoyed hearing about all the incredible work being done at the awards ceremony last night. 🌸🦆🦠
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Emma Griffiths
Emma Griffiths@griffiemma·
Integrating different types of data across sectors can be challenging. The Canadian One Health AMR genomics contextual data standard, built in partnership with the Can gov't, is readily adapted for international use and supports public data sharing. #GRDI osf.io/preprints/osf/…
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Benjamin Howden
Benjamin Howden@BenjaminHowden·
Proud and thankful for positive reception we've had on our approach to embedding pathogen genomics research at the public health interface @auspathogen National collaboration has been critical for generating evidence for use and impact of genomics-informed public health in Aus.
The Lancet Microbe@LancetMicrobe

New personal view article Implementing a national programme of pathogen genomics for public health: the Australian Pathogen Genomics Program (AusPathoGen) thelancet.com/journals/lanmi… #OpenAccess #OA

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Angela Donald
Angela Donald@Angelafdonald·
Out today, the recipe for pathogen genomics implementation in Australia. 📜 1 tbsp of strong existing collaborations, 2 tbsp governance agreements, 1 tbsp computational infrastructure, and 10 tbsp of belief in the cause. See below for instructions! sciencedirect.com/science/articl…
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CDGN
CDGN@CDGN_Australia·
The panel discussion on "Implementation and accreditation" in the CDGN & @AusPathoGen "Introduction to metagenomic sequencing" webinar is well underway with some facinating perspectives from our panellists 🧬🦠
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Australian Pathogen Genomics Program
Australian Pathogen Genomics Program@AusPathoGen·
This month's tracking numbers of sequences of priority pathogens from across Australia are now up on the website🦠🧬Follow the link to read more about the individual pathogen projects👉auspathogen.org.au
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Australian Pathogen Genomics Program
Australian Pathogen Genomics Program@AusPathoGen·
Did you know that thousands of sequences from across Australia have been contributed to the @AusPathoGen Program across several priority pathogens?🦠🧬You can see our monthly tracking numbers on the website and read more about the individual pathogens too👉auspathogen.org.au
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nobody
nobody@phiweger·
It is hard to overestimate Torsten's contribution to microbial genomics, since so much applied work runs on his stuff. Awesome news!
Torsten Seemann@torstenseemann

I am excited to win a CZI EOSS grant! This is the first grant I have ever won after 20+ years in science. It feels wonderful to finally be funded for my open-source contributions. With @wytamma we will deliver the next generation of my popular Snippy software! 🦘🦘🦘

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Torsten Seemann
Torsten Seemann@torstenseemann·
I am excited to win a CZI EOSS grant! This is the first grant I have ever won after 20+ years in science. It feels wonderful to finally be funded for my open-source contributions. With @wytamma we will deliver the next generation of my popular Snippy software! 🦘🦘🦘
biohub@biohub

Open source tools are crucial for biomedical research. We're collaborating with @KavliFoundation + @Wellcometrust to support developers & maintainers of critical #OpenSource projects, promoting innovation & community engagement in the field. More ▶️ czi.co/3zjN56l

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Keşfet

@torstenseemann @NatureComms @TheDohertyInst @AIMI_UTS @WHO @WHOWPRO @WHOSEARO @TheRMH