brucearonow

541 posts

brucearonow

brucearonow

@brucearonow

Katılım Kasım 2008
557 Takip Edilen204 Takipçiler
brucearonow
brucearonow@brucearonow·
@dgmacarthur @SimonsCas Totally agree on need, yield, value, and power of simple categorical aggregation and automation for updates. A tricky part particularly for peds has been whether re-calling is standard of care or research, and was there consent for the latter?
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Daniel MacArthur
Daniel MacArthur@dgmacarthur·
@SimonsCas Lots more to come here, including a portable version of the pipeline to ease deployment by other labs, and integration of LLM approaches to further ease the variant curation burden (in collaboration with Broad/Microsoft). Watch this space! #eshg2024
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Daniel MacArthur
Daniel MacArthur@dgmacarthur·
Zornitza Stark (@ZornitzaS) presenting on a collaboration with my team to develop an automated pipeline to regularly reanalyse genomic data from undiagnosed patients. We know reanalysis is highly effective, but (shockingly) rarely done in clinical settings. #eshg2024
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Isaac Kohane
Isaac Kohane@zakkohane·
A lot here to learn about @DaphneKoller and from her including: 1. Fast thinker who has not stopped since graduating from college at age 17. 2. Voting with her feet for impact and gave up tenured position at arguably top CS Dept for a swing at Education and then Biomedicine. 3. Sees double edge of new technologies but her response is to double down on the constructive side rather than trying to put the genie back into the bottle. 4. NEJM AI is lucky to have her on our editorial board.
NEJM AI@NEJM_AI

Dr. @DaphneKoller reflects on common misperceptions of AI’s progress. She explains why it's challenging to predict the future of AI during a period of exponential growth for the field. Full episode: nejm.ai/ep17

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brucearonow
brucearonow@brucearonow·
@NEJM_AI @DaphneKoller that is fantastic to hear you say that about the gloriousness of nonlinearity as evidenced by what LLMs are showing
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NEJM AI
NEJM AI@NEJM_AI·
Dr. @DaphneKoller reflects on common misperceptions of AI’s progress. She explains why it's challenging to predict the future of AI during a period of exponential growth for the field. Full episode: nejm.ai/ep17
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brucearonow
brucearonow@brucearonow·
@ReiseSousaLab Yikes you are right to be concerned about that extrapolation. However I think you did that a bit yourself. Why do U think triple ko localizes vitamin D response to nonimmune epithelial? Many myd88 indep, TLL dep myeloid dendritic, others at interface also likely unhappy w low D
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brucearonow
brucearonow@brucearonow·
@dancaron @zakkohane Why does there have to be host restricted shareability of published deidentified data? If they're making it accessible for all, you're just slowing progress.
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Isaac Kohane
Isaac Kohane@zakkohane·
Impressive performance and very useful annotation benchmark data set for oncology data scientists
Atul Butte@atulbutte

Thrilled to announce our new @NEJM_AI article (ai.nejm.org/doi/full/10.10…)! Lead author @madhumitasushil worked with @TravisZack2 @vekennedy @divneetM @bmeow19 all in @UCSF_BCHSI @UCSFCancer. To computationally understand where patients are in their care journey, we have to understand their clinical notes. This work shows how @OpenAI GPT-4 with @Azure enables a next-generation level of auto-curation from progress notes, including cancer. A thread 🧵…

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brucearonow
brucearonow@brucearonow·
@mortenoxe @NLMdirector @NLM_NIH @NIH @NIHDirector Hello anonymous flamer. Who wouldn't want to do all of what you say? The problems to solve to make all that real are social, economic, educational, and scientific. Please give some example action points to move forward in any of our goals. Be the change, not the flame
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Director, National Library of Medicine
It’s been a great honor and privilege to serve NLM! I am extremely proud of all that we have accomplished together during these past seven years.
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Isaac Kohane
Isaac Kohane@zakkohane·
Philip K Dick building up to his revelation ‘lateral time…overlapping worlds..hints from New Testament…matrix..programmer…’ @DrMJoyner @NAChristakis This filmed exposition 👇seesaws between evanescent enlightenment and possible psychosis and thereby makes clear that his works were his truth, initially subconscious but with full self awareness in his last novels. Rare talent.
Brian Roemmele@BrianRoemmele

Philip K. Dick wrote 44 novels, 121 short stories, and 14 short story collections. This is one of his last speeches given in Metz, France, 1977. It is fascinating.

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brucearonow
brucearonow@brucearonow·
@CHSommers Pediatric mental health is worse now than ever. Irreversible planetary damage has never been higher. Two essential measures of potential for quality of life.
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brucearonow
brucearonow@brucearonow·
@arjunmanrai How about dueling analyzers: please identify top scoring topics and points of view .. and for each topic, who and what scored more points? And why?
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brucearonow
brucearonow@brucearonow·
@parmita @lpachter The most common artefact I see seems to be coming from allowing too much inter-lineage relatedness based on shared expression of non lineage modules eg cell cycle, translation, mapk
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Lior Pachter
Lior Pachter@lpachter·
What is happening in single-cell genomics?! A new paper from the Karasuyama lab at @TMDUniversity (nature.com/articles/s4146…) shows three different RNA velocity / pseudotime plots, no pair of which agree, and then merrily goes on to tell some story. 👀
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Benjamin Ryan
Benjamin Ryan@benryanwriter·
A new study finds a strong association between cannabis use disorder (ie: weed addiction) and schizophrenia in young men. As many as 30% cases of the mental disorder in men 21 to 30 could've been prevented by averting cannabis use disorder.
Benjamin Ryan tweet media
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brucearonow
brucearonow@brucearonow·
@statesdj @benryanwriter Yes, huge question, but making your null hypothesis that there's no effect lacks real world priors. Which my gestalt says are way more dire than differential SCZ prevalence
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brucearonow
brucearonow@brucearonow·
Losing the beyond great Bev TS. As deep a disturbance in the Force as it gets. She inspired me, always. As she did everyone lucky enough to know and love her. cancerletter.com/obituary/20230…
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