Eli Van Allen

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Eli Van Allen

Eli Van Allen

@VanAllenLab

Clinical Computational Oncology @DanaFarber @harvardmed @broadinstitute | Chief - Population Sciences | Prev.: @Stanford @UCLA @UCSF | Discl.: https://t.co/EmrHxvg76N

Boston, MA Katılım Haziran 2010
2K Takip Edilen9K Takipçiler
Eli Van Allen
Eli Van Allen@VanAllenLab·
Fantastic work from @JoYatesResearch on multimodal AI for spatial biology discovery - see her notes below for more info! @DanaFarber @broadinstitute @CarolineUhler @Schmidt_Center
Josephine Yates@JoYatesResearch

🧵 Introducing SpatialFusion: a lightweight #multimodal #FoundationModel for pathway-informed spatial #niche mapping. 📄 doi.org/10.64898/2026.… It combines #histopathology and #SpatialTranscriptomics to identify functional microenvironments in tissue. Here’s what we found 👇

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Eli Van Allen
Eli Van Allen@VanAllenLab·
In our latest, we made + examined simulation frameworks for biologically-informed neural networks in cancer genomics and showed how germline + somatic integration shifts gene importance rankings (👋 BRCA2), even w/o gains in predictive accuracy... Congrats Gwen Miller et al!
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Ryan Collins
Ryan Collins@RyanLCollins13·
📣 We’re hiring a computational genomics postdoc! 📣 Our lab at @DanaFarber is looking for a postdoctoral fellow — details👇
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Eli Van Allen
Eli Van Allen@VanAllenLab·
In our latest, we used single cell ATAC to take a deep dive into kidney cancer chromatin programs and their relation to mutations in epigenetic regulators + interferon + endogenous retroviruses - congrats Sabrina Camp, Kevin Bi et al!
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Daniela Robles @daniela-oaks.bsky.social
Daniela Robles @daniela-oaks.bsky.social@daniela_oaks·
Muchas gracias Oscar y @mtzsaid, @AlethiaAlvarez, @DorianGarciaMD del INCan por su gran apoyo,y @patydesu, @EstefVazque, @Christian_moli_ del @LIIGH_UNAM por liderar este proyecto!!! #cienciamexicana
Oscar Arrieta@ogarrieta

Publicación histórica 🇲🇽 en @Nature de @daniela_oaks y de su grupo de investigación en la @unam, en colaboración con diferentes instituciones como el @incanMX @mtzsaid, @CCINSHAE_mx @SSalud_mx felicidades a todos los autores e instituciones @inmegen #melanoma #Cancer

Querétaro, Querétaro Arteaga 🇲🇽 Español
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Eli Van Allen
Eli Van Allen@VanAllenLab·
Here, we found out how liposarcomas - rare cancers arising from adipose precursor cells - can switch from indolent to lethal states A fascinating set of insights that even includes GLP-1 biology + therapeutics in cancer! Congrats Dr. Erica Pimenta et al @DanaFarber @ScienceTM
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Dana-Farber News
Dana-Farber News@DanaFarberNews·
“This rare cancer, liposarcoma, gives us a unique opportunity to study what GLP-1 drugs do to cancer cells,” @DanaFarber’s Dr. Erica Pimenta tells @washingtonpost about her research into whether the weight-loss medications could be a treatment pathway. Read more: bit.ly/4k08KUr
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Eli Van Allen
Eli Van Allen@VanAllenLab·
Here's our latest, where we explored how to augment LLMs with constantly evolving precision oncology knowledge (h/t @moalmanac), followed by collaboration with medical oncologists to test their queries - congrats Helena Jun, et al!
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Eli Van Allen
Eli Van Allen@VanAllenLab·
(Only minor nitpick was the reference in her talk to discoveries from "the late 20th century" as if they were from some distant era like 30-40 years ag-oh no...)
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Ramona Shelburne
Ramona Shelburne@ramonashelburne·
This fall, when ⁦Jason Collins⁩ was given a terminal brain cancer diagnosis, his twin brother Jarron said to him, “You have to fight.” Jason nodded. “I know how to do that.” I have the privilege of helping ⁦@jasoncollins98⁩ tell his story. espn.com/nba/story/_/id…
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Lachelle Dawn
Lachelle Dawn@Lachelle_Dawn·
If you're a hematology nerd headed to Orlando, I'd love it if you put my talk on your radar: "Sickle cell disease is associated with early-onset clonal hematopoiesis involving DNA damage response pathway mutations" Saturday, December 6, 2025 at 9:30 AM
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Keşfet

@JoYatesResearch @DanaFarber @broadinstitute @CarolineUhler @Schmidt_Center @daniela_oaks @mtzsaid @AlethiaAlvarez