Jan Lanzer

48 posts

Jan Lanzer

Jan Lanzer

@jan_lanzer

MD/PhD @saezlab, with interest in computational biology and cardiology https://t.co/k2o8CSMATp

Katılım Şubat 2021
308 Takip Edilen150 Takipçiler
Sabitlenmiş Tweet
Jan Lanzer
Jan Lanzer@jan_lanzer·
Glad to share this online: we’ve expanded our transcriptomics meta-analysis of heart failure to the multicellular level. Check out how you can use this reference to support your own data analysis! This was another rewarding team effort w @roramirezf94 #HeartFailure
Saez-Rodriguez Group@saezlab

What are the key disrupted multicellular processes in heart failure? In our new work we combine 23 years of molecular data with recent single-cell atlases to draw a cross-study patient map. How did we navigate the heart failure space? 🧵⬇️ doi.org/10.1101/2024.1…

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EMBL-EBI
EMBL-EBI@emblebi·
Organoids have incredible potential in drug discovery and disease modelling. In this Scientific Computing World interview, @Iguaracysousa discusses organoid construction, nanobots, and how bioinformatics is transforming biomedical research. scientific-computing.com/article/using-…
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Dominic Grün
Dominic Grün@dominic_grun·
Excited to share our study on spatio-temporal reconstruction of cardiac scar formation led by @ChanAndyson. We combine scRNA-seq with spatial transcriptomics to resolve the fibrotic niche and the niche of dedifferentiating cardiomyocytes. biorxiv.org/content/10.110…
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Thomas Walle
Thomas Walle@science_wallet·
In this elegant study @jan_lanzer and @roramirezf94 from @saezlab show how analyzing the coordinated expression of genes across cell types is critical to understanding heart failure. It’s great to see we’re moving from cell level analyses to patient and disease level analyses
Jan Lanzer@jan_lanzer

Glad to share this online: we’ve expanded our transcriptomics meta-analysis of heart failure to the multicellular level. Check out how you can use this reference to support your own data analysis! This was another rewarding team effort w @roramirezf94 #HeartFailure

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Saez-Rodriguez Group
Saez-Rodriguez Group@saezlab·
📢 Introducing CORNETO: a unified, knowledge-driven framework for multi-sample network learning & modeling via constrained optimization, supporting a wide variety of network methods and prior knowledge 💻Code: github.com/saezlab/corneto 📜Paper: doi.org/10.1101/2024.1… 🧵👇
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Pau Badia i Mompel
Pau Badia i Mompel@PauBadiaM·
After nearly two years of hard work, the paper I coauthored with my lifelong partner, and now fiancé, is out in @NatureNeuro 🎉 No podria estar més feliç d’haver-ho fet junts @Cels121 😊
Saez-Rodriguez Group@saezlab

Our work with @schirmerlab in multiple sclerosis (MS) is out today in @NatureNeuro. We investigated lesion progression and cell-cell communication events in MS using snRNA-seq and spatial transcriptomics 🧠 See below ⬇️ nature.com/articles/s4159…

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Malte Luecken
Malte Luecken@MDLuecken·
Are you interested in sc-spatial multiomics data, motivated by improving patient outcomes in lung cancer, and keen to join a young and growing lab taking single-cell atlassing to clinical applications? Please apply :). We're looking for Postdocs! jobs.helmholtz-muenchen.de/jobposting/43b…
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James Cranley
James Cranley@JamesCranley·
Thank you to my examiners Prof Bobola and Prof @mallat_lab , my partner in crime @kazukane , and Sarah @teichlab for being a fantastic supervisor. 🙏 Looking forward to lots of discoveries in the future 🧬🫀
Teichlab@teichlab

Congratulations to @JamesCranley for passing his viva at @SCICambridge @Cambridge_Uni ! We are incredibly proud of your achievements and excited for your future in science. Well done! Thanks to the incredible examiners Prof Ziad Mallat & Prof Nicoletta Bobola! @sangerinstitute

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EMBL-EBI
EMBL-EBI@emblebi·
We welcome Julio Saez-Rodriguez @JulioSaezRod as our new Head of Research! Associate Director for EMBL-EBI Services Jo McEntyre @jomcentyre has been promoted to Deputy Director of EMBL-EBI & Rolf Apweiler is stepping back to Associate Director as he looks towards retirement.
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Diego
Diego@deigsmnns·
Hi there! We have published our new method for deconvolution of spatial transcriptomics (ST) data in Bioinformatics: SpatialDDLS (academic.oup.com/bioinformatics…). This work stems from my Final Master’s project, so we are very happy to see it finally out!😊🥳
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Saez-Rodriguez Group
Saez-Rodriguez Group@saezlab·
1) Are you interested in computational approaches to study the immune system 🔎🦠by integrating single-cell + spatial multi-omics data with prior knowledge? Check our review 📖out now in @NatImmunol nature.com/articles/s4159… 🧵
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Saez-Rodriguez Group
Saez-Rodriguez Group@saezlab·
Our @jan_lanzer will present his work (together w @roramirezf94) on multicellular programs in heart failure at #EMBOCardioBiology this week. Come find him if you are interested in how we can leverage public single cell atlases to study coordinated events in myocardial remodeling
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Keşfet

@Iguaracysousa @PaulChungrohLee @Amgen @WUSTLmed @ChanAndyson @science_wallet @roramirezf94 @saezlab