Rahul kumar

Preprint alert 🚨 We develop a computational pipeline, CSI-TME, to infer interactions in the TME of IDH-Mut glioma by using bulk RNA-seq data and typically requires scRNA-seq data. @NCIDataSci @NCIKenAldape @NCIEytanRuppin @hannenhalli

Thrilled to share my new illustrations, together with @Rupsykhurana, on recent findings from our lab @r_sabarinathan @NCBS_Bangalore published in @MolOncology buff.ly/3GD9agz #scicomm #VisualArt #cancer #HPV Check out this news page for more news.ncbs.res.in/research-expla…

Excited to share that Anurag's work on cis-regulatory effect of #HPV integrations in #cervicalcancer is now published buff.ly/3GD9agz in @MolOncology. Thanks to the fantastic collaborators @kaiwalya17 @DimpleNotani @NCBS_Bangalore and @d_tavernari @CirielloLab @dbc_unil!!

The next talk at #EMBLCanGen @EMBLEvents is being given by @r_sabarinathan @NCBS_Bangalore, who is telling us about the impact of chromatin architecture on somatic mutational processes

Excited to share the work of @faseelaee from the lab, jointly with @DimpleNotani, @NCBS_Bangalore uncovering the molecular mechanism underlying increased somatic mutations at CTCF/Cohesin-binding sites (CBSs) at chromatin-loop anchors and TAD boundaries in cancer. See thread 👇

Very excited to share that my manuscript with @r_sabarinathan and @DimpleNotani on the mechanism behind increased mutations at CTCF/cohesin binding sites in cancers is now online on @biorxivpreprint @biorxiv_genomic Please give it a read here: biorxiv.org/content/10.110…

@r_sabarinathan The dedicated team behind this successful workshop @skouped, @nivedhya_venas , @MuskanGupta_6, @kumar99_rahul,  @mkjolly15, @SimonGrundSorensen, @naveen_luke @BratatiKahali, @shramdas, @karthikraman, @Sarthak_Sahoo_, Anurag, Faseela and Awadhesh along with the wonderful students.

Exciting to share this news article @IndiaBioscience about our recent work on prognostic association of immunoproteasome expression to immune checkpoint blockade therapies in solid tumors @MolOncology. Thanks @PurvaVariyar for this nice work and @RohanKhadilkarr for your views!!

Winning the evolutionary gamble - bacteria know a trick, do you? Follow the link! news.ncbs.res.in/research-expla… Congratulations @DeepaAgashe, Lindi, @MrudulaSane, and others on this beautiful work. Thanks, @JoannaMasel for sharing your thoughts!

⚠️In case you missed it! Prognostic association of immunoproteasome expression in solid tumours is governed by the immediate immune environment 👉buff.ly/42RyKrH #Immunoproteasome #Biomarker #SolidTumours #ImmuneMicroenvironment #MELNM @DynamicsLiving

Our recent work exploring immunoproteasome (IP) expression in solid tumours and its impact on the patients' survival and response to immune checkpoint blockade (ICB) therapies is now published in @MolOncology doi.org/10.1002/1878-0…. Congratulations @kumar99_rahul and Bhavya!!

@ninadoak So true!!

There's a periodicity in the life of a bioinformatics scientist where multiple days pass by installing software and making it compatible with one another. No science is done those days, just staring at rolling lines of package/ module installations. #Bioinformatics #Software

New preprint from the lab! Cis-regulatory effect of HPV integration in cervical tumours. Work lead by Anurag Kumar Singh in collaboration with @kaiwalya17 @DimpleNotani @d_tavernari @CirielloLab. Tweetorial👇biorxiv.org/content/10.110…

Very happy to present my work on prognostic association of immunoproteasome in solid tumors at #EMBOcancerEvolution workshop at Rimini,Itlay. Interesting talks, a lot of feedbacks and a great location!! #Cancergenomics

@TivadarDanka Awesome!! Enjoyed so much!!

"Probability is the logic of science." There is a deep truth behind this conventional wisdom: probability is the mathematical extension of logic, augmenting our reasoning toolkit with the concept of uncertainty. In-depth exploration of probabilistic thinking incoming.

@TivadarDanka Awesome!! Keep 'em coming

The single most undervalued fact of linear algebra: matrices are graphs, and graphs are matrices. Encoding matrices as graphs is a cheat code, making complex behavior simple to study. Let me show you how!

@warikoo may checkout wavel.ai

Would you recommend any India-based translation services firm? Looking for an agency to translate my Hinglish videos into English + provide subtitles.

Break it down.

@LarusStoneN Interested!!

Interested in building software in biotech? I'm starting a new Slack community for people interested in discussing problems/solutions in this space. DM me for an invite #biotech #bioinformatics #cheminformatics #software

@karishmabisht05 Congratulations!!

I am happy to share that I successfully defended my #PhD today!!! I am incredibly grateful to everyone who contributed to this important milestone in my life — especially @wakemanlab 😁🎉🎓 #PhinisheD #PhDone @OpenAcademics @AcademicChatter @thephdstory