
Phil Charles
54 posts

Phil Charles
@philcmsms
Bioinformatician, @ceclindgren group and formerly @kesslerlabox. Maybe a bit too fond of javascript.
Bicester, UK Katılım Eylül 2020
42 Takip Edilen39 Takipçiler
Phil Charles retweetledi

Age-Modulated Immuno-Metabolic Proteome Profiles of Deceased Donor Kidneys Predict 12-Month Posttransplant Outcome
@philcmsms
@bdi_oxford
@InQuod
@kesslerlabox
@NDSurgicalSci
@NHSBT_RD
that medrxiv.org/content/10.110…
@beck_vaughan
@Sarahfawwaz
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Phil Charles retweetledi

Goodbye to weeks-long quantification! directLFQ for label-free quantification (LFQ) allows arbitrarily large #proteomics sample cohorts (>100,000) at improved accuracy. It shifts ion traces on top of each other, scaling linearly in DDA or DIA. biorxiv.org/content/10.110…
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Phil Charles retweetledi

(1/n) How accurate and precise are DIA (dia-PASEF here) peptide quantities? nature.com/articles/s4146…. This is affected not just by quantification algorithms but also the FDR of MBR.

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Phil Charles retweetledi

I’m excited to share our paper ‘A New Graph Node Classification Benchmark: Learning Structure from Histology Cell Graphs’ which was selected for oral presentation at the New Frontiers in Graph Learning workshop at NeurIPS 2022! @glfrontiers🧵
arxiv.org/abs/2211.06292

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Phil Charles retweetledi
Phil Charles retweetledi

I am so very proud to have been awarded the 2023 Mary Lyon Medal by the @GenSocUK ✨
The Genetics Society@GenSocUK
Congratulations to Prof Cecilia Lindgren @ceclindgren, director of @bdi_oxford, the winner of our Mary Lyon Medal for her research dissecting the genetic landscape of common complex diseases. #awards #genetics genetics.org.uk/medals-and-pri…
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Clear and efficient summary of Oxford whole organ perfusion studies by @JPHunterTxSurg (with lots of high res pictures to follow lunch 🙂) plus of course shout out to Mito Queen @letizia_lofaro at @InQuod.
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.@InQuod symposium 2022 about to begin in Newcastle. Ready for a day of cool transplant science!

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Phil Charles retweetledi

Work with @adanpinto, @BenediktKessler & @TaoDong14 on enhancing cancer immunotherapy. #CancerResearch #Immunotherapy
ndm.ox.ac.uk/study/dphil-th…

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First two lines are spot on, but I can under-predict a Gantt without any outside help
ErrantScience@ErrantScience
Gantt charts are one of the few charts that are entirely made from wishful thinking
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Phil Charles retweetledi

#proteomics #SoftwareDeveloper Please vote. Which one is better? Closed source project with good methods description and tutorials. Or open source project with bad/vague methods description and (almost) no tutorial.
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🚨Postdoc Position🚨
@ceclindgren lab at @bdi_oxford are looking for a #proteomics and #IntegrativeOmics bioinformatician to look at transplant outcomes w/ @kaisar_maria & ADMIRE. Come join a lovely lab working with a huge range of bioinf techniques!
👉tinyurl.com/3ywy39bw
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Phil Charles retweetledi
Phil Charles retweetledi

HT-MS maps the sepsis plasma proteome and clinical subgroups in 2622 patients @proteomOX @KnightGenetics @RomanFi13911774 @philcmsms @CmdOxford @NDM medrxiv.org/content/10.110…
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Closes on Tuesday!
Phil Charles@philcmsms
🚨Postdoc Position🚨 Come work at the awesome, lovely, welcoming @ceclindgren lab at @bdi_oxford, in collaboration with @kaisar_maria & the ADMIRE project. We're modelling kidney transplant outcomes, integrating omic, imaging & clinical data. Closes 26/7. tinyurl.com/3v5737b7
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Congratulations to Deniz Kaya for passing his PhD viva !!! Very well deserved!! And many thanks to his external @LabVermeulen and internal @BenediktKessler examiners. @RobKlose

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