Ayu Hutami Syarif

@UniofOxford @thorogoodchris1 Credits should also be addressed to the Indonesian researchers.

Rafflesia hasseltii: A plant seen more by tigers than people 🇮🇩 Yesterday, Oxford Botanic Garden's @thorogoodchris1 was part of a team that trekked day and night through tiger-patrolled Sumatran (an island in Indonesia) rainforests to find Rafflesia hasseltii.

Last week I had the honor of presenting both of my main PhD project and research stay abroad on COPD at the ERS Seminar 2025

Respimmun retreat 2025. Perhaps this is the last time we are together as RESPImmun family ❤️🫁

🌹Meet #ROSIE, our new AI that predicts spatial multi-protein expression straight from routine H&E images. Built on a large co‑staining dataset (>1k samples, 16M+ cells). It enables cell phenotyping & tissue structure insights w/o extra assays.

INITIAL STEPS IN WRITING AND SUBMITTING A RESEARCH PAPER (1/6)

🧵5 Top Free Alternatives to BioRender for Scientific Illustrations! These five websites offer free scientific illustrations for biologists. Great for presentations, research papers and other research communication needs. Save and share the post!

Our Single Cell Genomics Day - highlighting our favorite new sc/spatial methods - starts Friday at 10AM ET! The most common question we get: is this open to anyone? Yes! Talks are free and live-streamed (no registration required) on Youtube and satijalab.org/scgd

We identify evidence of off-target probe binding in the 10x Genomics #Xenium v1 Human Breast Gene Expression Panel, compromising the accuracy of resulting #singlecell #spatialtranscriptomics See our preprint for more details: biorxiv.org/content/10.110… #AcademicTwitter 🧵👇 1/n

FREE research courses for PhDs and early career researchers. Imagine having access to the same insider knowledge that took me years to gather, all at your fingertips. Here’s what’s available:

Common statistical tests are linear models (or: how to teach stats) lindeloev.github.io/tests-as-linea… I wish I were taught like this.

1️⃣ Spatial and molecular insights into microglial roles in cerebellar aging 🔗 researchhub.com/paper/9276698/…

2️⃣ Simultaneous analysis of single-cell gene expression & morphology provides new insights into how microglia change with age 🔗 researchhub.com/paper/9276700/…

How cool is this? Michal Lipinski from @broadinstitute presenting stacked #Illumina spatial slides of the mouse brain with subcellular transcriptome resolution #AGBTGM

Identification and characterization of cell niches in tissue from spatial omics data at single-cell resolution nature.com/articles/s4146…

PhD Students - Here are the 50 most useful tools for researchers. 𝐋𝐢𝐭𝐞𝐫𝐚𝐭𝐮𝐫𝐞 𝐑𝐞𝐯𝐢𝐞𝐰 1. @LitmapsApp 2. @ResearchPal 3. @ConnectedPapers 4. @Scite 5. @answerthisio 6. @SemanticScholar 7. @R_Discovery 8. PubMed 9. @zotero 10. @EndNoteNews 11. @mendeley_com 𝐏𝐚𝐩𝐞𝐫 𝐖𝐫𝐢𝐭𝐢𝐧𝐠 1. @teampaperpal 2. @Reviewit 3. @thetrinkaai 4. @scispace 5. @Grammarly 6. @overleaf 7. @googledocs 8. @scrivener 9. @juliusai 10. Hemingway Editor 𝐑𝐞𝐬𝐞𝐚𝐫𝐜𝐡 𝐏𝐫𝐞𝐬𝐞𝐧𝐭𝐚𝐭𝐢𝐨𝐧 1. @canva 2. @mindthegraph 3. @BeautifulAI_ 4. @gammaapp 5. @piktochart 6. Designsai 7. @VismeApp 8. @prezi 9. @infogram 10. Vizzlo 𝐏𝐚𝐩𝐞𝐫 𝐑𝐞𝐚𝐝𝐢𝐧𝐠 1. @Scholarcy 2. @EnagoRead 3. @sci_summary 4. @ScribeaiHQ 5. Petal AI 6. @Outreadofficial 7. Paper Digest 8. PubReader 9. DeepDyve 𝐃𝐚𝐭𝐚 𝐀𝐧𝐚𝐥𝐲𝐬𝐢𝐬 1. @spss 2. @tableau 3. @PowerBI 4. @NVivoSoftware 5. @Minitab 6. @msexcel 7. @clcoding 8. @googlesheets 9. JASP How to use them? For this, check my YouTube: @DrFaheemUllah" target="_blank" rel="nofollow noopener">youtube.com/@DrFaheemUllah Any other tool you'd like to add?

More #evidence for the existence of #CD8 #Regulatory #Tcells nature.com/articles/s41... Check our previous paper also>KIR+CD8+ T cells suppress pathogenic T cells and are active in autoimmune diseases and COVID-19 | Science science.org/doi/10.1126/sc…

In statistical modeling, particularly within the context of regression analysis and analysis of variance (ANOVA), fixed effects and random effects are two fundamental concepts that describe different types of variables or factors in a model. Here’s a straightforward explanation: #Statistics #DataScience #Research #Science

1/ Keen to share the story of my postdoc research in @TheXavierLab! We built a massive resource characterizing the spatial landscape of the gut, and yes, we dug deep into the biology too. If you’ve got a minute, let me walk you through the story. 🧵👇 nature.com/articles/s4158…

To make our fantastic CITE-seq data set of postnatal thymocytes accessible to the community, we have launched a shiny web app for interactive exploration. Go check it out! ccgg.ugent.be/shiny/htsa_thy… Moreover, scRNA-seq and Visium spatial data can be found at cellxgene.cziscience.com/collections/fc…

Beda otak anak yang baca buku & screen time > 1 jam 👇🏻 Anak usia dini, screen time >60 menit, rentan gangguan emosi dan fokus. Peningkatan durasi screen time menurunkan konektivitas otak pada pusat bahasa, visual, & kecerdasan dibandingkan membaca buku.