Chris Chatham

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Chris Chatham

Chris Chatham

@chchatham

Pure science on blue sky (chchatham dot bsky dot social). On X, pushback on the redshift

NYC metro area เข้าร่วม Mayıs 2011
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Eric Topol
Eric Topol@EricTopol·
The turning point for rare diseases, which affect >300 million people around the world. A call to get rid of its many structural obstacles, to consider it as molecular surgery unlike drug treatments gift link: nytimes.com/2026/04/09/opi…
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Chris Chatham
Chris Chatham@chchatham·
How obvious, in hindsight. Bidirectionally symmetric predictivity is the necessary test of how brain-like a model may be because richer representations can always predict reduced ones (but not vice versa).
Jorge Bravo Abad@bravo_abad

The missing half of the neural network–brain comparison For a decade, the standard benchmark for artificial neural networks as models of the brain has been forward predictivity: learn a linear mapping from model activations to neural recordings and measure explained variance. Top models of the macaque inferior temporal (IT) cortex—central to object recognition—have plateaued near 50% regardless of architecture. Muzellec and Kar argue this plateau hides something important. Two models can score identically on forward predictivity while relying on fundamentally different internal strategies. One may have many units tightly coupled to IT responses; the other may reach the same score with a smaller aligned subset while carrying a large pool of biologically inaccessible dimensions. To expose this, they introduce reverse predictivity: instead of asking how well model features predict neurons, they ask how well IT neurons predict individual model units. A truly brain-like model should be bidirectionally predictable—just as two monkeys' IT populations predict each other symmetrically, which the authors confirm as their empirical baseline. Across 39 architectures—CNNs, transformers, self-supervised and robust models—reverse predictivity is consistently lower than forward predictivity and the two metrics are uncorrelated. Strikingly, higher ImageNet accuracy predicts lower reverse predictivity. Adversarial training helps; higher dimensionality hurts. The "common" units identified this way predict primate behavior more consistently across species and models than the "unique" ones inaccessible from neural activity. For AI in drug discovery, neurotechnology, or computational biology, this has a direct implication: forward accuracy alone does not guarantee that a model's internal representations are embedded in the biological system it claims to describe. When those representations guide mechanistic interpretations or experimental decisions, the mismatch can mislead. Paper: Muzellec et al., Nature Machine Intelligence (2026) | nature.com/articles/s4225…

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Manoj Doss not exist
Manoj Doss not exist@ManojDoss·
This paper has been a long time coming. Instead of reanalyzing the same old resting-state fMRI datasets, we combined nearly all datasets around the world. Note that we didn't exactly find indisputable evidence for "default mode network disintegration." nature.com/articles/s4159…
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Saloni
Saloni@salonium·
I’m a disbeliever in accidental discoveries (at least, in biology). Whenever I’ve looked into one, the story turns out to be false. The most famous is penicillin – supposedly, the fungi wafted in through a window, fell into a petri dish of cultured staphylococci, and suppressed the bacteria’s growth. But in a recent article (asimov.press/p/penicillin-m…), @kevinsblake explains that doesn’t really work (grown staphylococci aren’t affected by penicillin; it only works if introduced before the bacteria begin growing); plus, Fleming’s notes on the discovery provide very little detail and the specific results he described couldn’t be replicated by other scientists (even though penicillin does work against staphylococci when introduced correctly.) There are more: Pasteur’s supposedly accidental discovery of a chicken cholera vaccine was more likely the result of systematic work by his then-assistant, Émile Roux. (jstor.org/stable/2332836…) And, as @NikoMcCarty writes, the discovery of GFP, nanopore sequencing, and optogenetics are also often described as accidents, but none of them happened that way either. nikomc.com/2026/04/01/opt… People love serendipity, so why am I bursting their bubble? I don’t think this is limited to accidental discoveries; I think many historical science anecdotes are highly embellished: - Edward Jenner didn’t deliberately expose a young boy with full-blown smallpox to test his vaccine (he used variolation); and he wasn’t the first to try using cowpox bsky.app/profile/scient… - Cobra catching bounties in British India didn’t lead to a rise in the number of snakebites, and there was only hearsay evidence that cobras were bred in response at all twitter-thread.com/t/169650089580… - Barry Marshall didn’t develop stomach ulcers from drinking a concoction of H. pylori (he did develop gastritis though…) cdn.centerforinquiry.org/wp-content/upl… - No one knows who actually found the highly-productive strain of penicillin on a cantaloupe, but it probably wasn’t 'Moldy Mary' scientificdiscoveries.ars.usda.gov/tellus/stories… But in this case it irks me for an additional reason – it gives the impression that innovation happens sporadically, by chance, when there are actually ways that we can systematically speed it up – such as better funding, institutions and incentives. So: are there any true accidental discoveries that hold up to scrutiny?
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Joni Askola
Joni Askola@joni_askola·
1/6 Look at the absolute disaster unfolding right now, and remember exactly who told you to vote for Trump in 2024. The people who sold you this catastrophe should be discredited forever, and you should never listen to their political advice again🧵
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Cliff Pickover
Cliff Pickover@pickover·
Word patterns a person uses when describing a dream can distinguish between schizophrenia and bipolar disorder, illnesses that are often difficult to tell apart. The Freudian notion that “dreams are the royal road to the unconscious” is clinically useful, after all. Source: nature.com/articles/srep0…
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Art Candee 🍿🥤
Art Candee 🍿🥤@ArtCandee·
Spotted at a No Kings protest in Durham, North Carolina! Epic creativity!
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I Dissent
I Dissent@DissentFu·
@RonFilipkowski Been carrying this sign for 20 years
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Richard Hanania
Richard Hanania@RichardHanania·
An incredible chart. Just another reminder of what a fraud “intellectual conservatism” is now. The justification for Trump is supposed to be something like elites treat us unfairly. No, compared to your guy, they have been paragons of decency and virtue.
Jeremiah Johnson 🌐@JeremiahDJohns

I know it's boring and repetitive to talk about how grossly evil Trump is, but the fact remains: Trump is grossly evil, in a way that's pretty much unprecedented in this country.

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Jason Crawford
Jason Crawford@jasoncrawford·
Interesting take: “Every prior intelligence explosion—primate sociality, human language, writing, institutions—wasn't an upgrade to individual cognitive hardware. It was the emergence of a new socially aggregated unit of cognition. … The scaling frontier isn't just bigger models. It's richer social systems—and the institutions to govern them” @profjamesevans
James Evans@profjamesevans

Our new essay is out in Science: "Agentic AI and the Next Intelligence Explosion" For decades, the AI "singularity" has been imagined as a single, godlike mind bootstrapping itself to omniscience. In this piece with the inimitable Benjamin Bratton (@bratton) and Blaise Agüera y Arcas (@blaiseaguera), we argue this vision is wrong in its most fundamental assumption. Every prior intelligence explosion—primate sociality, human language, writing, institutions—wasn't an upgrade to individual cognitive hardware. It was the emergence of a new socially aggregated unit of cognition. AI is extending this sequence, not breaking from it. The evidence is already inside the models themselves. In recent work, we showed that frontier reasoning models like DeepSeek-R1 don't improve by "thinking longer"—they spontaneously simulate internal multi-agent debates, what we call a "society of thought" (lnkd.in/guNfRtXh). Reinforcement learning for accuracy alone causes models to rediscover what epistemology and cognitive science have long suggested: robust reasoning is a social process, even within a single mind. This opens a vast design space. A century of research on team composition, hierarchy, role differentiation, and structured disagreement has barely been brought to bear on AI reasoning. The toolkits of organizational science become blueprints for next-generation AI. Outside the model, we've entered the era of human-AI centaurs—composite actors that are neither purely human nor purely machine. Agents that fork, differentiate, recombine. Recursive societies of thought that expand when complexity demands and collapse when problems resolve. The scaling frontier isn't just bigger models. It's richer social systems—and the institutions to govern them. Just as human societies rely on persistent institutional templates (courtrooms, markets, bureaucracies), scalable AI ecosystems will need digital equivalents. The Founders would have recognized the logic: no single concentration of intelligence should regulate itself. The intelligence explosion is already here. Not as a singular ascending mind, but as a combinatorial society complexifying—intelligence growing like a city. The question is whether we'll build the social infrastructure worthy of what it's becoming. No mind is an island. Read it here in Science (science.org/doi/10.1126/sc…) or free on the arXiv (arxiv.org/abs/2603.20639)

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David Dayen
David Dayen@ddayen·
Practically everything he found was price-gouging from contractors or outsourcing. The mindbending part of DOGE was that it was going to increase public spending by cutting public staff. Building state capacity saves money.
Mayor Zohran Kwame Mamdani@NYCMayor

Government must deliver for working people—and every dollar in our budget should work as hard as they do. That’s why I directed every agency to cut waste and help close our budget gap. Here’s some of what we found.

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Michael Ostacher, MD, MPH
Michael Ostacher, MD, MPH@RecoveryDoctor·
This paper is in preprint but appears to show the same attenuation of effect size with increasing methodological rigor in rTMS studies as has been shown in trials of Acceptance and Commitment Therapy (ACT). The longer and better you study things, the less they might actually work
Rolf Degen@DegenRolf

Meta-analysis: The effects of repetitive transcranial magnetic stimulation (rTMS) on the brain are much smaller than previously thought, and have been shown to diminish in newer, more sophisticated studies — providing yet another example of the infamous 'decline effect'. Repetitive transcranial magnetic stimulation (rTMS) is extensively used in both clinical and research settings, yet the underlying neurophysiological mechanisms, particularly outside motor cortex, remain poorly understood. Here, we provide the first large-scale systematic review and meta-analysis to jointly evaluate high- and low-frequency rTMS and Theta-Burst-Stimulation (TBS) across primary motor cortex (M1), non-primary motor cortex, and cerebellar regions, Our key findings reveal that the effects of both excitatory and inhibitory protocols on motor evoked potentials (MEPs) are substantially smaller than previously reported, and show considerable between-study heterogeneity and indications of potential publication bias, raising concerns about the stability and reproducibility of these estimates even within primary motor cortex. Furthermore, inhibitory motor evoked potential effects fail to survive sham-normalization. Critically, across TMS-EEG measures that directly indexed cortical excitability particularly outside primary motor cortex, we found no consistent effects for any protocol. Furthermore, meta-regression revealed decreasing effects over years, driven by greater methodological rigor and neuronavigation use. We noted consistent attenuation of effect sizes across all protocols in more recent, methodologically rigorous studies with larger sample sizes, neuronavigated, sham-controlled and test-retest designs indicating that earlier literature likely overestimated neurophysiological efficacy of single-session rTMS. Collectively, these results suggest that rTMS-induced changes in cortical excitability are considerably more context-dependent, variable, and less robust than previously assumed, challenging the traditional binary model of “excitatory or inhibitory” neuromodulation dependent on stimulation protocols. [The decline effect (“The Truth Wears Off”) is the phenomenon where the strength of scientific findings—particularly in psychology and medicine—diminishes over time, with subsequent replications showing smaller effect sizes than the original studies.]

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Jing Liang 🇺🇦
Jing Liang 🇺🇦@AppleHelix·
Claude was able to find Vinay Prasad's CV from 2023 (for tenure application?). onlinelibrary.wiley.com/pb-assets/CV%2… VP actually received 2 separate grants from the Arnold Foundation. One from 2017-20, the other 20-23. And probably is still supported by the foundation. Total from 2017-23 was ~$4m. Most recently, the foundation was funding VP $800K per year.
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Pearl Freier@PearlF

According to ⬇️, some FDA political appointees have financial ties to the Arnold family foundation/ventures. There's documentation of this elsewhere so it's not only an anonymous X acct saying this. $ from ideological group that's against HIV & hep C drugs too $XBI $BBC $IBB

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Peter Suzman
Peter Suzman@Biomaven·
Could be why pembro might work better than others in its class - this unintended off-target activity is against a legitimate fetal-origin target!
Aaron Ring@aaronmring

One striking example is pembrolizumab (anti-PD-1), the top-grossing mAb and overall best-selling pharmaceutical in the world. In addition to PD-1, we found that it also bound TDGF1/Cripto, and we confirmed that interaction with orthogonal assays.

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Chris Chatham
Chris Chatham@chchatham·
@DKThomp I’m not sure I can forgive you Derek for using the expression a=b/c=d to mean a=b & c=d
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Marios Georgakis
Marios Georgakis@MariosGeorgakis·
Modern drug development is frustratingly inefficient with <10% of drug entering clinical development making it to the market.
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Jordan Farrell
Jordan Farrell@J_S_Farrell·
🚨New model, new collaboration! Very excited to share this work with Emily Osterweil & team, gaining insight into FXS pathophysiology using human cortex. It takes an amazing and multidisciplinary team to make this possible, which we are super grateful for!🚨
bioRxiv Neuroscience@biorxiv_neursci

FMR1 reduction alters cellular and circuit properties in human cortex biorxiv.org/content/10.648… #biorxiv_neursci

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