Best of luck on your next adventure, @pranithakrishna. Thank you for your hard work and all the great memories! We will miss you!
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GarberLab
49 posts
GarberLab retweetledi
Here is our attempt to assign enhancers to target genes using 3D genomic interactions and there by predict the role of enhancers in regulating gene expression cell.com/molecular-cell…
@GarberLab @UmassMedbioinfo @garber_manuel
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Congratulations to Dr. Vangala (@pranithakrishna), Speaker for the GSBS Class of 2020! @UMassMedical @GSBS_UMassMed umassmed.edu/news/news-arch…
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GarberLab retweetledi
@GSBS_UMassMed class speaker Pranitha Vangala shares what it's like graduating during a pandemic.
Watch @pranithakrishna's story here: bit.ly/2AaMfuj
#UMassMedical20 #commencement
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GarberLab retweetledi
Our recent survey about challenges in data analysis facilities / bioinformatics cores #__ffn_sectitle" target="_blank" rel="nofollow noopener">ncbi.nlm.nih.gov/pmc/articles/P…
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Interesting approach from @IdoAmitLab to classify infected vs bystander cells. looking forward to seeing how their method applies to various virus studies
IdoAmitLab@IdoAmitLab
We are excited to share ‘Host-viral infection maps reveal signatures of severe COVID-19 patients’ cell.com/cell/fulltext/… led by @bost_pierre and @AmirGiladi. Collab with the Zheng Lab from the Shenzhen Third People’s Hospital and Benno Schwikowski from @institutpasteur 1/13
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Super excited to watch our post-doc @elisadonnard share her work in Models of Neurological Diseases session #TAGC20 #TAGC2020 at 11.45 am (EST). Also check out her preprint biorxiv.org/content/10.110…
Elisa@elisadonnard
Happy to share our work on the heterogeneity of the response of different cortical cell types to the loss of FMRP in the mouse model of #FragileX today at 11:45AM (EDT) at #TAGC20
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Check out our manuscript on distributed data processing platform ! @biyonur @nephantes @garber_manuel @UmassMedbioinfo @UMassMedical
Alper Kucukural@nephantes
Our DolphinNext paper is online. DolphinNext: A distributed data processing platform for high throughput genomics. bmcgenomics.biomedcentral.com/articles/10.11…
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Check out the preprint: We not only identified an uncharacterized cell type in the upper respiratory tract but also identified genetic shifts of the influenza virus during one season @yumingcao1 @garber_manuel
biorxiv.org/content/10.110…
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A great resource to find potential targets for COVID-19. We are happy to be a part of these combined efforts.
Jose Ordovas-Montanes@ordovas_phd
1) We are sharing our manuscript identifying that the SARS-CoV-2 receptor ACE2 is an interferon stimulated gene in human upper airway epithelial cells. Results from an amazing team effort: papers.ssrn.com/sol3/papers.cf… (n/16)
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Yuming Cao from @GarberLab
shows that single cell sequencing in influenza infection yields a gold mine of data and is definitely nothing to sneeze at!!!
@GSBS_UMassMed
@UMassMedical
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Check out the new preprint from
@GarberLab @elisadonnard @garber_manuel @raya_shu
We used scRNA-Seq to uncover cell-type specific known and novel molecular networks in FXS.
biorxiv.org/content/10.110…
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GarberLab retweetledi
Congratulations !! @Greer_Lab
Paul Greer@Greer_Lab
Incredibly elated to have our work selected for a New Innovator award from the NIH. Huge thank you to @NIH_CommonFund, all the members of my laboratory, and to past and current mentors for your help and support. #NIHHighRisk #Grateful commonfund.nih.gov/newinnovator/A…
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